Publicaties Bio-Informatica
Peripheral blood transcriptome profiling enables monitoring disease progression in dystrophic mice and patients
Peripheral blood transcriptome profiling enables monitoring disease progression in dystrophic mice and patients | EMBO Mol Med | April 2021 Mirko Signorelli, Mitra Ebrahimpoor, Olga Veth, Kristina Hettne, Nisha Verwey, Raquel García-Rodríguez, Christa L Tanganyika-deWinter, Luz B Lopez Hernandez, Rosa Escobar Cedillo, Benjamín Gómez Díaz, Olafur T Magnusson, Hailiang Mei, Roula Tsonaka, Annemieke Aartsma-Rus, Pietro [...]
CACTUS: integrating clonal architecture with genomic clustering and transcriptome profiling of single tumor cells
CACTUS: integrating clonal architecture with genomic clustering and transcriptome profiling of single tumor cells | Genome Med | 2021 Mar 24 Shadi Darvish Shafighi, Szymon M Kiełbasa, Julieta Sepúlveda-Yáñez, Ramin Monajemi, Davy Cats, Hailiang Mei, Roberta Menafra, Susan Kloet, Hendrik Veelken, Cornelis A M van Bergen, Ewa Szczurek Abstract [...]
Cingulate networks associated with gray matter loss in Parkinson’s disease show high expression of cholinergic genes in the healthy brain
Cingulate networks associated with gray matter loss in Parkinson's disease show high expression of cholinergic genes in the healthy brain | Eur J Neurosci | June 2021 Arlin Keo, Oleh Dzyubachyk, Jeroen van der Grond, Anne Hafkemeijer, Wilma D J van de Berg, Jacobus J van [...]
CBA: Cluster-Guided Batch Alignment for Single Cell RNA-seq
CBA: Cluster-Guided Batch Alignment for Single Cell RNA-seq | April 2021 | Frontiers in Genetics |DOI:10.3389/fgene.2021.644211 Wenbo Yu, Ahmed Mahfouz, Marcel J.T. Reinders Abstract and Figures The power of single-cell RNA sequencing (scRNA-seq) in detecting cell heterogeneity or developmental process is becoming more [...]
Comprehensive diagnostics of acute myeloid leukemia by whole transcriptome RNA sequencing
Comprehensive diagnostics of acute myeloid leukemia by whole transcriptome RNA sequencing | January 2021 | Leukemia. 2021 Jan;35(1):47-61. doi: 10.1038/s41375-020-0762-8. Epub 2020 Mar 3. PMID: 32127641. Arindrarto W, Borràs DM, de Groen RAL, van den Berg RR, Locher IJ, van Diessen [...]
The Transcriptome in Transition: Global Gene Expression Profiles of Young Adult Fruit Flies Depend More Strongly on Developmental Than Adult Diet
The Transcriptome in Transition: Global Gene Expression Profiles of Young Adult Fruit Flies Depend More Strongly on Developmental Than Adult Diet | March 2021 | Front. Ecol. Evol. May CM, van den Akker EB, Zwaan BJ Abstract Developmental diet is known [...]